| # | Rider | Time |
|---|---|---|
| 1 | PORJoão AlmeidaUAE Team Emirates XRG | 20h 04' 49" |
| 2 | ESPEnric MasMovistar Team | + 1' 52" |
| 3 | GERMaximilian SchachmannSoudal–Quick-Step | + 1' 59" |
| 4 | GERFlorian LipowitzRed Bull–Bora–Hansgrohe | + 2' 07" |
| 5 | DENMattias SkjelmoseLidl–Trek | + 2' 17" |
| 6 | BELIlan Van WilderSoudal–Quick-Step | + 2' 18" |
| 7 | ESPAlex AranburuCofidis | + 2' 45" |
| 8 | ITASimone VelascoXDS Astana Team | + 3' 43" |
| 9 | GBROscar OnleyTeam Picnic–PostNL | + 3' 50" |
| 10 | FRAClément ChampoussinXDS Astana Team | + 3' 55" |
Times in Sydney time (AEDT). Results: Wikipedia, “2025 Tour of the Basque Country”, CC BY-SA 4.0. Unofficial, updated after the event.